Dear forum members,
Below is my code, but I am getting permission denied when I try to run the script. Can someone explain what I am missing. I am using Mojave and try to run script on terminal.
#!/bin/bash
read -p "amino acid: " AAA
if [ "$AAA" == "ALA" ] || [ "$AAA" == "VAL" ] || [ "$AAA" == "ARG" ] || [ "$AAA" == "ASN" ] || [ "$AAA" == "ASP" ] ||
[ "$AAA" == "CYS" ] || [ "$AAA" == "GLY" ] || [ "$AAA" == "ILE" ] || [ "$AAA" == "LEU" ] || [ "$AAA" == "LYS" ] ||
[ "$AAA" == "MET" ] || [ "$AAA" == "PHE" ] || [ "$AAA" == "PRO" ] || [ "$AAA" == "SER" ] || [ "$AAA" == "THR" ] ||
[ "$AAA" == "TRP" ] || [ "$AAA" == "TYR" ] || [ "$AAA" == "HIS" ] || [ "$AAA" == "GLN" ] || [ "$AAA" == "GLU" ]
then
for i in HS_*.pdb.txt; do
cat $i | grep -o -i $AAA | wc -l
done
elif [ "$AAA" == 0 ]
then
exit 1
else
read -p "amino acid: " AAA
fi
Here's the error:
I will look forward to your responses.
Sincerely,
User