Not writing output

Shell Programming and Scripting
1

In the attached bash in the convert function the out_position.txt in not being writing to the annovar directory and I can not figure out why. Thank you :).

2

This line seems to be meant to generate it, so make sure its being called:

C:/Python27/python.exe C:/Python27/run_batch_job.py C:/Python27/out.txt C:\annovar\out_position.txt PositionConverter
1 Like
3

Thank you :).