and a file with allele freq ( 2000 entries)
Chr Position MAF
chr1 881918 0.007
chr1 979748 0.007
chr1 1120377 0.007
chr1 1178925 0.036
I would like the original file matched with the allele freq and print out the output file with 5000 entries.
Chr Position MAF
chr1 879108 NULL
chr1 881918 0.007
chr1 896874 NULL
...
Thank you but that only prints the positions which match with the original file.
The desired output is to print all 5000 entries from the original file whether or not it has a 3rd value.
Well, this gives me exactly all the entries common with original and allele freq file without the MAF values
chr1 979748
chr1 1120377
chr1 1178925
chr1 1222958